Source code for spynnaker.pyNN.models.neuron.plasticity.stdp.timing_dependence.timing_dependence_pfister_spike_triplet

# Copyright (c) 2017 The University of Manchester
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     https://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

from spinn_utilities.overrides import overrides
from spinn_front_end_common.utilities.constants import (
    BYTES_PER_SHORT, BYTES_PER_WORD)
from spynnaker.pyNN.data import SpynnakerDataView
from spynnaker.pyNN.models.neuron.plasticity.stdp.common import (
    get_exp_lut_array)
from spynnaker.pyNN.models.neuron.plasticity.stdp.timing_dependence import (
    AbstractTimingDependence)
from spynnaker.pyNN.models.neuron.plasticity.stdp.synapse_structure import (
    SynapseStructureWeightOnly)


class TimingDependencePfisterSpikeTriplet(AbstractTimingDependence):
    """
    A timing dependence STDP rule based on spike triplets.

    Jean-Pascal Pfister, Wulfram Gerstner. Triplets of Spikes in a Model of
    Spike Timing-Dependent Plasticity. *Journal of Neuroscience*,
    20 September 2006, 26 (38) 9673-9682; DOI: 10.1523/JNEUROSCI.1425-06.2006
    """
    __slots__ = [
        "__synapse_structure",
        "__tau_minus",
        "__tau_minus_data",
        "__tau_plus",
        "__tau_plus_data",
        "__tau_x",
        "__tau_x_data",
        "__tau_y",
        "__tau_y_data",
        "__a_plus",
        "__a_minus"]
    __PARAM_NAMES = ('tau_plus', 'tau_minus', 'tau_x', 'tau_y')

    # noinspection PyPep8Naming
    def __init__(self, tau_plus, tau_minus, tau_x, tau_y, A_plus, A_minus):
        r"""
        :param float tau_plus: :math:`\tau_+`
        :param float tau_minus: :math:`\tau_-`
        :param float tau_x: :math:`\tau_x`
        :param float tau_y: :math:`\tau_y`
        :param float A_plus: :math:`A^+`
        :param float A_minus: :math:`A^-`
        """
        self.__tau_plus = tau_plus
        self.__tau_minus = tau_minus
        self.__tau_x = tau_x
        self.__tau_y = tau_y
        self.__a_plus = A_plus
        self.__a_minus = A_minus

        self.__synapse_structure = SynapseStructureWeightOnly()

        ts = SpynnakerDataView.get_simulation_time_step_ms()
        self.__tau_plus_data = get_exp_lut_array(ts, self.__tau_plus)
        self.__tau_minus_data = get_exp_lut_array(ts, self.__tau_minus)
        self.__tau_x_data = get_exp_lut_array(ts, self.__tau_x, shift=2)
        self.__tau_y_data = get_exp_lut_array(ts, self.__tau_y, shift=2)

    @property
    def tau_plus(self):
        r"""
        :math:`\tau_+`

        :rtype: float
        """
        return self.__tau_plus

    @property
    def tau_minus(self):
        r"""
        :math:`\tau_-`

        :rtype: float
        """
        return self.__tau_minus

    @property
    def tau_x(self):
        r"""
        :math:`\tau_x`

        :rtype: float
        """
        return self.__tau_x

    @property
    def tau_y(self):
        r"""
        :math:`\tau_y`

        :rtype: float
        """
        return self.__tau_y

    @property
    def A_plus(self):
        r"""
        :math:`A^+`

        :rtype: float
        """
        return self.__a_plus

    @A_plus.setter
    def A_plus(self, new_value):
        self.__a_plus = new_value

    @property
    def A_minus(self):
        r"""
        :math:`A^-`

        :rtype: float
        """
        return self.__a_minus

    @A_minus.setter
    def A_minus(self, new_value):
        self.__a_minus = new_value

[docs] @overrides(AbstractTimingDependence.is_same_as) def is_same_as(self, timing_dependence): if not isinstance( timing_dependence, TimingDependencePfisterSpikeTriplet): return False return ( (self.__tau_plus == timing_dependence.tau_plus) and (self.__tau_minus == timing_dependence.tau_minus) and (self.__tau_x == timing_dependence.tau_x) and (self.__tau_y == timing_dependence.tau_y))
@property def vertex_executable_suffix(self): """ The suffix to be appended to the vertex executable for this rule. :rtype: str """ return "pfister_triplet" @property def pre_trace_n_bytes(self): """ The number of bytes used by the pre-trace of the rule per neuron. :rtype: int """ # Triplet rule trace entries consists of two 16-bit traces - R1 and R2 # (Note: this is the pre-trace size, not the post-trace size) return BYTES_PER_SHORT * 2
[docs] @overrides(AbstractTimingDependence.get_parameters_sdram_usage_in_bytes) def get_parameters_sdram_usage_in_bytes(self): lut_array_words = ( len(self.__tau_plus_data) + len(self.__tau_minus_data) + len(self.__tau_x_data) + len(self.__tau_y_data)) return lut_array_words * BYTES_PER_WORD
@property def n_weight_terms(self): """ The number of weight terms expected by this timing rule. :rtype: int """ return 2
[docs] @overrides(AbstractTimingDependence.write_parameters) def write_parameters( self, spec, global_weight_scale, synapse_weight_scales): # Write lookup tables spec.write_array(self.__tau_plus_data) spec.write_array(self.__tau_minus_data) spec.write_array(self.__tau_x_data) spec.write_array(self.__tau_y_data)
@property def synaptic_structure(self): """ The synaptic structure of the plastic part of the rows. :rtype: AbstractSynapseStructure """ return self.__synapse_structure
[docs] @overrides(AbstractTimingDependence.get_parameter_names) def get_parameter_names(self): return self.__PARAM_NAMES